Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871395.1_cds_XP_016434390.1_30453
CDS Infomation

[gene=LOC107760802] [db_xref=GeneID:107760802] [protein=probable myosin-binding protein 5 isoform X2] [protein_id=XP_016434390.1] [location=complement(join(30419..30624,30730..31575,32367..33102))] [gbkey=CDS]
Sequence

ATGGCTTCGCGATCTTTCAAGCGTTTGGTTGAACAGAAGGTGGGAAGAGTTGGGGTTTTC
TTCATATACGCTATTCTTGAATGGGCGATGATCATTATTCTTTTCATTGATGGTTTTCTT
GCATTTTTCACCAATGAATTCGCCAAGTTCTTTGAATTGAAAGTTCCCTGCCTGCTATGC
ACGAGGATCGATCATATTTTCATTAAAAGGAACTCTAGTTTTTATTATAATGATTCCATT
TGTGAAGTTCACAAAAAGGACATCTCTTCCCTTGCGTATTGTCATGTCCACAAGAAGCTT
TCTGATATTAGGAACATGTGTGAAGGCTGCCTTCTCTCGTTTGCAACAGAGAAGGATTCT
GATTGTGATAGGTATAAGTCATTAGTTGGGATTTTGCATAAAGACATTGATTGCTTTATG
GATGGAGATGATCAGAGAGTTTCCATAAAATCAGTGAAGAATGAAGATGAAGTCATCAAA
ACTGGAACTGTTGTTGTCCTGAGGTGTTCTTGTTGTGGGGAGCCTCTGAAACTGAGGTCT
AAATATACGCGGGACTTGTCTATAAATGAAAATATTTATTCACAAGCTCCTGCCCCGTCT
CCTCGATCTCCCTTGACAACATGGAGAAATGAGGAATCGCGCAATCTAGAATTGCCTCAT
GTTCGGTACACAGAGCTGAAGTTTACCTCAGATAATGACTCCGACCTTCCAGATGATGAG
GGTCACCAAAATGCAGGTAGAGATGATATTAATGCAGCTACAGATCCTGAGGACATACAT
GATGAATCTTGCAAAACCCCAAATTCTGCAAGAAACAAAATCTTTGGGATCCCATTGTCA
GACTCAGCTCAAGCCAGTCCTAAGTGGCCTTATAGGCCCAAAAAATTGGGTGGTGATAAG
AGTGAATTCATTTCAGATGCTAATGACACGAGTGCAGCGAATGAGGCAGATGATGATATC
TTGCATCGCTTGAAGAGGCAGGTTCGTCTGGACCGAAAGTCTCTCATGGAACTGTACATG
GAATTGGATGAAGAAAGAAGTGCCTCTGCTGTTGCAGCAAACAATGCCATGGCCATGATC
ACGCGCTTGCAAGCAGAGAAGGCAGCTGTCCAAATGGAAGCTTTGCAATATCAGAGAATG
ATGGAAGAGCAGGCTGAATATGACCAAGAGGCCTTACAAGTCATGAAAGATCTTGTTTTA
AAGAGGGAGGAGGAGATAAAGGTATTGGAAGCTGAACTTGAGACCTACAGGGAGAAATAT
GGACATGTCAAGAGAGTAGGTAGTGAGGTCTGTGAAGTCGATGCGGATGATGATTATCAA
GAGTTGAAATCTCATTCTGTATCATCCTTCGGTGAAAGATCAGAATGTGGCAGTCCTCGT
GATATGGATCAGGATGGAGTAAACGAGTTCCATATTGAACGTCCTGGGAAATATGGAGAG
GGAACTGTTGATGAATCAAACCTTGATTTTGAGAATGAGAGATCTTATCTACAGGATTTG
TTGACAAACCTTGAAAAGAAGATTAAAATACCTCCGGATGTTGAATCTCATGTGTTAGAA
TCAAATGTGATTCAAGACAGAGGGAATGAGAATAAGGTTACCCTTACAAGAGAAGTGTCT
CTAATCAGAGAGAGATTGAGAGCTGTCGAAGCAGAAAGTGGCTTCTTAAAACACGCAGCC
AGGACATTACAGAGGGGTGGAGAAGGAACCAAACTCTTGACTGAGATAGCTCAACATCTG
CGGGAGCTTAGATACCCTGATACAGCAACAGGGAATGCAGATGCATGA

Peptide Sequence

PEP ID

XP_016434390.1
PEP Infomation

PREDICTED: probable myosin-binding protein 5 isoform X2 [Nicotiana tabacum]
Sequence

MASRSFKRLVEQKVGRVGVFFIYAILEWAMIIILFIDGFLAFFTNEFAKFFELKVPCLLC
TRIDHIFIKRNSSFYYNDSICEVHKKDISSLAYCHVHKKLSDIRNMCEGCLLSFATEKDS
DCDRYKSLVGILHKDIDCFMDGDDQRVSIKSVKNEDEVIKTGTVVVLRCSCCGEPLKLRS
KYTRDLSINENIYSQAPAPSPRSPLTTWRNEESRNLELPHVRYTELKFTSDNDSDLPDDE
GHQNAGRDDINAATDPEDIHDESCKTPNSARNKIFGIPLSDSAQASPKWPYRPKKLGGDK
SEFISDANDTSAANEADDDILHRLKRQVRLDRKSLMELYMELDEERSASAVAANNAMAMI
TRLQAEKAAVQMEALQYQRMMEEQAEYDQEALQVMKDLVLKREEEIKVLEAELETYREKY
GHVKRVGSEVCEVDADDDYQELKSHSVSSFGERSECGSPRDMDQDGVNEFHIERPGKYGE
GTVDESNLDFENERSYLQDLLTNLEKKIKIPPDVESHVLESNVIQDRGNENKVTLTREVS
LIRERLRAVEAESGFLKHAARTLQRGGEGTKLLTEIAQHLRELRYPDTATGNADA

Transcript Sequence

Gene sequence data has not been registered.